species:   Comil
pid:       PID1144
parent:    milR12
paralog:   
locus:     NW_006271970.1:5122007-5122134
matures:   ['GCAAACCGCCACAUCCCGCAGCU', 'CUGUGCUGGAACAGGCUGUCU']
srr:       SRR8054058
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054058.cram NW_006271970.1:5122007-5122134

0 out of bounds
1 alignments
1 proper strand
0 stranded perfect matches

        ***********************                                                                *************************        
CCCUGCAAAGCUGUGCUGGAACAGGCUGUCUCAGAUGAUGUGCAUAUCCGAGGGCGACGUGCCGCCUCCAAUGGACCUGGAGAUGACUAUCAUGACGGCAAACCGCCACAUCCCGCAGCUCAGCCCGG
((..((..(((((((..(((...((((((((((((((((.(.((..((((.(((((......)))))....))))..)).).))...)))).))).))))....)))...))))))))))..))..))
-------------------------------------------------------------------------------------------------GCAAACCGCCACAUCCCGCAGCU-------- l=23 a=0 c
----------CUGUGCUGGAACAGGCUGUCU------------------------------------------------------------------------------------------------- l=21 a=0 c*
-------------------------------------------------------------------------------------------------GCAAACCGCCACAUCCCGCAGCU-------- l=23 a=0 ma
----------CUGUGCUGGAACAGGCUGUCU------------------------------------------------------------------------------------------------- l=21 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-110111101100
fn-011
